xarray CfRadial2 backend¶
In this example, we read CfRadial2 data files using the xarray cfradial2
backend.
[1]:
import wradlib as wrl
import warnings
warnings.filterwarnings("ignore")
import matplotlib.pyplot as pl
import numpy as np
import xarray as xr
try:
get_ipython().run_line_magic("matplotlib inline")
except:
pl.ion()
/home/runner/micromamba-root/envs/wradlib-notebooks/lib/python3.11/site-packages/tqdm/auto.py:22: TqdmWarning: IProgress not found. Please update jupyter and ipywidgets. See https://ipywidgets.readthedocs.io/en/stable/user_install.html
from .autonotebook import tqdm as notebook_tqdm
Load CfRadial2 Volume Data¶
[2]:
fpath = "netcdf/cfrad.20080604_002217_000_SPOL_v36_SUR_cfradial2.nc"
f = wrl.util.get_wradlib_data_file(fpath)
vol = wrl.io.open_cfradial2_dataset(f)
Downloading file 'netcdf/cfrad.20080604_002217_000_SPOL_v36_SUR_cfradial2.nc' from 'https://github.com/wradlib/wradlib-data/raw/pooch/data/netcdf/cfrad.20080604_002217_000_SPOL_v36_SUR_cfradial2.nc' to '/home/runner/work/wradlib-notebooks/wradlib-notebooks/wradlib-data'.
Inspect RadarVolume¶
[3]:
display(vol)
<wradlib.RadarVolume>
Dimension(s): (sweep: 9)
Elevation(s): (0.5, 1.1, 1.8, 2.6, 3.6, 4.7, 6.5, 9.1, 12.8)
Inspect root group¶
The sweep
dimension contains the number of scans in this radar volume. Further the dataset consists of variables (location coordinates, time_coverage) and attributes (Conventions, metadata).
[4]:
vol.root
[4]:
<xarray.Dataset> Dimensions: (sweep: 9) Dimensions without coordinates: sweep Data variables: volume_number int64 0 platform_type <U5 'fixed' instrument_type <U5 'radar' primary_axis <U6 'axis_z' time_coverage_start <U20 '2008-06-04T00:15:03Z' time_coverage_end <U20 '2008-06-04 00:22:16Z' latitude float64 ... longitude float64 ... altitude float64 ... sweep_group_name (sweep) <U7 'sweep_0' 'sweep_1' ... 'sweep_7' 'sweep_8' sweep_fixed_angle (sweep) float32 0.4999 1.099 1.802 ... 6.498 9.102 12.8 Attributes: version: None title: None institution: None references: None source: None history: None comment: im/exported using wradlib instrument_name: None fixed_angle: 0.5
Inspect sweep group(s)¶
The sweep-groups can be accessed via their respective keys. The dimensions consist of range
and time
with added coordinates azimuth
, elevation
, range
and time
. There will be variables like radar moments (DBZH etc.) and sweep-dependend metadata (like fixed_angle
, sweep_mode
etc.).
[5]:
display(vol[0])
<xarray.Dataset> Dimensions: (azimuth: 480, range: 996) Coordinates: sweep_mode <U20 ... rtime (azimuth) datetime64[ns] 2008-06-04T00:15:34 ... 2008... * range (range) float32 150.0 300.0 ... 1.492e+05 1.494e+05 * azimuth (azimuth) float32 0.0 0.75 1.5 ... 357.8 358.5 359.2 elevation (azimuth) float32 ... longitude float64 ... latitude float64 ... altitude float64 ... time datetime64[ns] 2008-06-04T00:15:03 Data variables: (12/16) sweep_number int32 ... polarization_mode |S32 ... prt_mode |S32 ... follow_mode |S32 ... sweep_fixed_angle float32 0.4999 target_scan_rate float32 ... ... ... antenna_transition (azimuth) int8 ... n_samples (azimuth) int32 ... r_calib_index (azimuth) int8 ... scan_rate (azimuth) float32 ... DBZ (azimuth, range) float32 ... VR (azimuth, range) float32 ... Attributes: fixed_angle: 0.5
Goereferencing¶
[6]:
swp = vol[0].copy().pipe(wrl.georef.georeference_dataset)
Plotting¶
[7]:
swp.DBZ.plot.pcolormesh(x="x", y="y")
pl.gca().set_aspect("equal")
[8]:
fig = pl.figure(figsize=(10, 10))
swp.DBZ.wradlib.plot_ppi(proj="cg", fig=fig)
[8]:
<matplotlib.collections.QuadMesh at 0x7f588b0fdc10>
[9]:
import cartopy
import cartopy.crs as ccrs
import cartopy.feature as cfeature
map_trans = ccrs.AzimuthalEquidistant(
central_latitude=swp.latitude.values, central_longitude=swp.longitude.values
)
[10]:
map_proj = ccrs.AzimuthalEquidistant(
central_latitude=swp.latitude.values, central_longitude=swp.longitude.values
)
pm = swp.DBZ.wradlib.plot_ppi(proj=map_proj)
ax = pl.gca()
ax.gridlines(crs=map_proj)
print(ax)
< GeoAxes: +proj=aeqd +ellps=WGS84 +lon_0=120.43350219726562 +lat_0=22.52669906616211 +x_0=0.0 +y_0=0.0 +no_defs +type=crs >
[11]:
map_proj = ccrs.Mercator(central_longitude=swp.longitude.values)
fig = pl.figure(figsize=(10, 8))
ax = fig.add_subplot(111, projection=map_proj)
pm = swp.DBZ.wradlib.plot_ppi(ax=ax)
ax.gridlines(draw_labels=True)
[11]:
<cartopy.mpl.gridliner.Gridliner at 0x7f588b0fba10>
[12]:
import cartopy.feature as cfeature
def plot_borders(ax):
borders = cfeature.NaturalEarthFeature(
category="physical", name="coastline", scale="10m", facecolor="none"
)
ax.add_feature(borders, edgecolor="black", lw=2, zorder=4)
map_proj = ccrs.Mercator(central_longitude=swp.longitude.values)
fig = pl.figure(figsize=(10, 8))
ax = fig.add_subplot(111, projection=map_proj)
DBZ = swp.DBZ
pm = DBZ.where(DBZ > 0).wradlib.plot_ppi(ax=ax)
plot_borders(ax)
ax.gridlines(draw_labels=True)
[12]:
<cartopy.mpl.gridliner.Gridliner at 0x7f587bd38750>
[13]:
import matplotlib.path as mpath
theta = np.linspace(0, 2 * np.pi, 100)
center, radius = [0.5, 0.5], 0.5
verts = np.vstack([np.sin(theta), np.cos(theta)]).T
circle = mpath.Path(verts * radius + center)
map_proj = ccrs.AzimuthalEquidistant(
central_latitude=swp.latitude.values,
central_longitude=swp.longitude.values,
)
fig = pl.figure(figsize=(10, 8))
ax = fig.add_subplot(111, projection=map_proj)
ax.set_boundary(circle, transform=ax.transAxes)
pm = swp.DBZ.wradlib.plot_ppi(proj=map_proj, ax=ax)
ax = pl.gca()
ax.gridlines(crs=map_proj)
[13]:
<cartopy.mpl.gridliner.Gridliner at 0x7f588bc92350>
[14]:
fig = pl.figure(figsize=(10, 8))
proj = ccrs.AzimuthalEquidistant(
central_latitude=swp.latitude.values, central_longitude=swp.longitude.values
)
ax = fig.add_subplot(111, projection=proj)
pm = swp.DBZ.wradlib.plot_ppi(ax=ax)
ax.gridlines()
[14]:
<cartopy.mpl.gridliner.Gridliner at 0x7f587bb22490>
[15]:
swp.DBZ.wradlib.plot_ppi()
[15]:
<matplotlib.collections.QuadMesh at 0x7f587bdc2ed0>
Inspect radar moments¶
The DataArrays can be accessed by key or by attribute. Each DataArray has dimensions and coordinates of it’s parent dataset. There are attributes connected which are defined by Cf/Radial standard.
[16]:
display(swp.DBZ)
<xarray.DataArray 'DBZ' (azimuth: 480, range: 996)> array([[ 20.699957, 39.96934 , 29.650644, ..., -2.799595, -3.549335, -1.650112], [ 13.829709, 35.710747, 8.869345, ..., -18.780428, -3.080303, -4.519378], [ -9.129745, 14.810412, 4.539685, ..., 0.179822, -0.550375, -3.519132], ..., [ 5.889927, 26.049406, 32.379555, ..., -2.550866, -1.060269, -1.900617], [ 0.959765, 23.579884, 9.29929 , ..., -8.680257, -5.039932, -2.410512], [ 20.079912, 39.15031 , 13.190121, ..., -4.91912 , -3.160252, -1.319658]], dtype=float32) Coordinates: (12/15) sweep_mode <U20 'azimuth_surveillance' rtime (azimuth) datetime64[ns] 2008-06-04T00:15:34 ... 2008-06-04T0... * range (range) float32 150.0 300.0 450.0 ... 1.492e+05 1.494e+05 * azimuth (azimuth) float32 0.0 0.75 1.5 2.25 ... 357.0 357.8 358.5 359.2 elevation (azimuth) float32 0.5164 0.5219 0.5164 ... 0.5219 0.5219 0.5219 longitude float64 120.4 ... ... x (azimuth, range) float32 -6.556e-06 -1.311e-05 ... -1.955e+03 y (azimuth, range) float32 150.0 300.0 ... 1.492e+05 1.493e+05 z (azimuth, range) float32 46.0 47.0 48.0 ... 2.714e+03 2.718e+03 gr (azimuth, range) float32 150.0 300.0 ... 1.492e+05 1.494e+05 rays (azimuth, range) float32 0.0 0.0 0.0 0.0 ... 359.2 359.2 359.2 bins (azimuth, range) float32 150.0 300.0 ... 1.492e+05 1.494e+05 Attributes: long_name: Computed Horizontal Co-polar Reflectivit standard_name: equivalent_reflectivity_factor units: dBZ threshold_field_name: threshold_value: -9999.0 sampling_ratio: 1.0 grid_mapping: grid_mapping
Create simple plot¶
Using xarray features a simple plot can be created like this. Note the sortby('time')
method, which sorts the radials by time.
[17]:
swp.DBZ.sortby("rtime").plot(x="range", y="rtime", add_labels=False)
[17]:
<matplotlib.collections.QuadMesh at 0x7f587bc1ecd0>
[18]:
fig = pl.figure(figsize=(5, 5))
pm = swp.DBZ.wradlib.plot_ppi(proj={"latmin": 33e3}, fig=fig)
Mask some values¶
[19]:
swp["DBZ"] = swp["DBZ"].where(swp["DBZ"] >= 0)
swp["DBZ"].plot()
[19]:
<matplotlib.collections.QuadMesh at 0x7f587bfa5850>
Export to ODIM and CfRadial2¶
[20]:
vol.to_odim("cfradial2_as_odim.h5")
vol.to_cfradial2("cfradial2_as_cfradial2.nc")
Import again¶
[21]:
vola = wrl.io.open_odim_dataset(
"cfradial2_as_odim.h5",
decode_coords=True,
backend_kwargs=dict(keep_azimuth=True, keep_elevation=True, reindex_angle=False),
)
[22]:
volb = wrl.io.open_cfradial2_dataset("cfradial2_as_cfradial2.nc")
Check equality¶
Some variables need to be dropped, since they are not exported to the other standards or differ slightly (eg. re-indexed ray times).
[23]:
drop = set(vol[0]) ^ set(vola[0]) | set({"rtime"})
xr.testing.assert_allclose(vol.root, vola.root)
xr.testing.assert_allclose(
vol[0].drop_vars(drop), vola[0].drop_vars(drop, errors="ignore")
)
xr.testing.assert_allclose(vol.root, volb.root)
xr.testing.assert_equal(vol[0], volb[0])
xr.testing.assert_allclose(vola.root, volb.root)
xr.testing.assert_allclose(
vola[0].drop_vars(drop, errors="ignore"), volb[0].drop_vars(drop, errors="ignore")
)