xarray Rainbow5 backend¶
In this example, we read Rainbow5 data files using the wradlib rainbow xarray backend.
[1]:
import glob
import gzip
import io
import wradlib as wrl
import warnings
warnings.filterwarnings('ignore')
import matplotlib.pyplot as pl
import numpy as np
import xarray as xr
try:
get_ipython().magic("matplotlib inline")
except:
pl.ion()
Load Rainbow5 Volume Data¶
[2]:
fpath = 'rainbow/2013051000000600dBZ.vol'
f = wrl.util.get_wradlib_data_file(fpath)
vol = wrl.io.open_rainbow_dataset(f, reindex_angle=False)
Inspect RadarVolume¶
[3]:
display(vol)
<wradlib.RadarVolume>
Dimension(s): (sweep: 14)
Elevation(s): (0.6, 1.4, 2.4, 3.5, 4.8, 6.3, 8.0, 9.9, 12.2, 14.8, 17.9, 21.3, 25.4, 30.0)
Inspect root group¶
The sweep dimension contains the number of scans in this radar volume. Further the dataset consists of variables (location coordinates, time_coverage) and attributes (Conventions, metadata).
[4]:
vol.root
[4]:
<xarray.Dataset>
Dimensions: (sweep: 14)
Coordinates:
time datetime64[ns] 2013-05-10T00:00:06
longitude float64 6.38
altitude float64 116.7
sweep_mode <U20 'azimuth_surveillance'
latitude float64 50.86
Dimensions without coordinates: sweep
Data variables:
volume_number int64 0
platform_type <U5 'fixed'
instrument_type <U5 'radar'
primary_axis <U6 'axis_z'
time_coverage_start <U20 '2013-05-10T00:00:06Z'
time_coverage_end <U20 '2013-05-10T00:03:14Z'
sweep_group_name (sweep) <U8 'sweep_0' 'sweep_1' ... 'sweep_13'
sweep_fixed_angle (sweep) float64 0.6 1.4 2.4 3.5 ... 17.9 21.3 25.4 30.0
Attributes:
version: None
title: None
institution: None
references: None
source: None
history: None
comment: im/exported using wradlib
instrument_name: None
fixed_angle: 0.6Inspect sweep group(s)¶
The sweep-groups can be accessed via their respective keys. The dimensions consist of range and time with added coordinates azimuth, elevation, range and time. There will be variables like radar moments (DBZH etc.) and sweep-dependend metadata (like fixed_angle, sweep_mode etc.).
[5]:
display(vol[0])
<xarray.Dataset>
Dimensions: (azimuth: 361, range: 400)
Coordinates:
* azimuth (azimuth) float64 46.52 47.51 48.51 49.52 ... 44.52 45.51 46.51
elevation (azimuth) float64 0.6 0.6 0.6 0.6 0.6 ... 0.6 0.6 0.6 0.6 0.6
* range (range) float32 125.0 375.0 625.0 ... 9.962e+04 9.988e+04
time datetime64[ns] 2013-05-10T00:00:06
rtime (azimuth) datetime64[ns] 2013-05-10T00:00:06.015151500 ... 20...
longitude float64 6.38
latitude float64 50.86
altitude float64 116.7
sweep_mode <U20 'azimuth_surveillance'
Data variables:
DBZH (azimuth, range) float32 ...
Attributes:
fixed_angle: 0.6Goereferencing¶
[6]:
swp = vol[0].copy().pipe(wrl.georef.georeference_dataset)
Plotting¶
[7]:
swp.DBZH.plot.pcolormesh(x='x', y='y')
pl.gca().set_aspect('equal')
[8]:
fig = pl.figure(figsize=(10,10))
swp.DBZH.wradlib.plot_ppi(proj='cg', fig=fig)
[8]:
<matplotlib.collections.QuadMesh at 0x7f0a2de61810>
[9]:
import cartopy
import cartopy.crs as ccrs
import cartopy.feature as cfeature
map_trans = ccrs.AzimuthalEquidistant(central_latitude=swp.latitude.values,
central_longitude=swp.longitude.values)
[10]:
map_proj = ccrs.AzimuthalEquidistant(central_latitude=swp.latitude.values,
central_longitude=swp.longitude.values)
pm = swp.DBZH.wradlib.plot_ppi(proj=map_proj)
ax = pl.gca()
ax.gridlines(crs=map_proj)
print(ax)
< GeoAxes: +proj=aeqd +ellps=WGS84 +lon_0=6.379967 +lat_0=50.856633 +x_0=0.0 +y_0=0.0 +no_defs +type=crs >
[11]:
map_proj = ccrs.Mercator(central_longitude=swp.longitude.values)
fig = pl.figure(figsize=(10,8))
ax = fig.add_subplot(111, projection=map_proj)
pm = swp.DBZH.wradlib.plot_ppi(ax=ax)
ax.gridlines(draw_labels=True)
[11]:
<cartopy.mpl.gridliner.Gridliner at 0x7f0a2db235e0>
[12]:
import cartopy.feature as cfeature
def plot_borders(ax):
borders = cfeature.NaturalEarthFeature(category='physical',
name='coastline',
scale='10m',
facecolor='none')
ax.add_feature(borders, edgecolor='black', lw=2, zorder=4)
map_proj = ccrs.Mercator(central_longitude=swp.longitude.values)
fig = pl.figure(figsize=(10,8))
ax = fig.add_subplot(111, projection=map_proj)
DBZH = swp.DBZH
pm = DBZH.where(DBZH > 0).wradlib.plot_ppi(ax=ax)
plot_borders(ax)
ax.gridlines(draw_labels=True)
[12]:
<cartopy.mpl.gridliner.Gridliner at 0x7f0a2dbabfd0>
[13]:
import matplotlib.path as mpath
theta = np.linspace(0, 2*np.pi, 100)
center, radius = [0.5, 0.5], 0.5
verts = np.vstack([np.sin(theta), np.cos(theta)]).T
circle = mpath.Path(verts * radius + center)
map_proj = ccrs.AzimuthalEquidistant(central_latitude=swp.latitude.values,
central_longitude=swp.longitude.values,
)
fig = pl.figure(figsize=(10,8))
ax = fig.add_subplot(111, projection=map_proj)
ax.set_boundary(circle, transform=ax.transAxes)
pm = swp.DBZH.wradlib.plot_ppi(proj=map_proj, ax=ax)
ax = pl.gca()
ax.gridlines(crs=map_proj)
[13]:
<cartopy.mpl.gridliner.Gridliner at 0x7f0a2dcec970>
[14]:
fig = pl.figure(figsize=(10, 8))
proj=ccrs.AzimuthalEquidistant(central_latitude=swp.latitude.values,
central_longitude=swp.longitude.values)
ax = fig.add_subplot(111, projection=proj)
pm = swp.DBZH.wradlib.plot_ppi(ax=ax)
ax.gridlines()
[14]:
<cartopy.mpl.gridliner.Gridliner at 0x7f0a360ea470>
[15]:
swp.DBZH.wradlib.plot_ppi()
[15]:
<matplotlib.collections.QuadMesh at 0x7f0a2c5526b0>
Inspect radar moments¶
The DataArrays can be accessed by key or by attribute. Each DataArray has dimensions and coordinates of it’s parent dataset.
[16]:
display(swp.DBZH)
<xarray.DataArray 'DBZH' (azimuth: 361, range: 400)>
array([[24.5, 11.5, 7.5, ..., nan, nan, nan],
[24.5, 10. , 2.5, ..., nan, nan, nan],
[24.5, 12.5, 3.5, ..., nan, nan, nan],
...,
[25. , 8. , 7. , ..., nan, nan, nan],
[25. , 9.5, 7.5, ..., nan, nan, nan],
[25.5, 12. , 8. , ..., nan, nan, nan]], dtype=float32)
Coordinates: (12/15)
* azimuth (azimuth) float64 46.52 47.51 48.51 49.52 ... 44.52 45.51 46.51
elevation (azimuth) float64 0.6 0.6 0.6 0.6 0.6 ... 0.6 0.6 0.6 0.6 0.6
* range (range) float32 125.0 375.0 625.0 ... 9.962e+04 9.988e+04
time datetime64[ns] 2013-05-10T00:00:06
rtime (azimuth) datetime64[ns] 2013-05-10T00:00:06.015151500 ... 20...
longitude float64 6.38
... ...
x (azimuth, range) float64 90.69 272.1 ... 7.225e+04 7.244e+04
y (azimuth, range) float64 86.01 258.0 ... 6.855e+04 6.873e+04
z (azimuth, range) float64 118.0 120.6 ... 1.744e+03 1.75e+03
gr (azimuth, range) float64 124.6 374.6 ... 9.96e+04 9.985e+04
rays (azimuth, range) float64 46.52 46.52 46.52 ... 46.51 46.51 46.51
bins (azimuth, range) float32 125.0 375.0 ... 9.962e+04 9.988e+04
Attributes:
long_name: Equivalent reflectivity factor H
units: dBZ
standard_name: radar_equivalent_reflectivity_factor_hCreate simple plot¶
Using xarray features a simple plot can be created like this. Note the sortby('rtime') method, which sorts the radials by time.
[17]:
swp.DBZH.sortby('rtime').plot(x="range", y="rtime", add_labels=False)
[17]:
<matplotlib.collections.QuadMesh at 0x7f0a2c422c50>
[18]:
fig = pl.figure(figsize=(5,5))
pm = swp.DBZH.wradlib.plot_ppi(proj={'latmin': 3e3}, fig=fig)
Mask some values¶
[19]:
dbzh = swp['DBZH'].where(swp['DBZH'] >= 0)
dbzh.plot(x="x", y="y")
[19]:
<matplotlib.collections.QuadMesh at 0x7f0a2da97130>
[20]:
vol[0]
[20]:
<xarray.Dataset>
Dimensions: (azimuth: 361, range: 400)
Coordinates:
* azimuth (azimuth) float64 46.52 47.51 48.51 49.52 ... 44.52 45.51 46.51
elevation (azimuth) float64 0.6 0.6 0.6 0.6 0.6 ... 0.6 0.6 0.6 0.6 0.6
* range (range) float32 125.0 375.0 625.0 ... 9.962e+04 9.988e+04
time datetime64[ns] 2013-05-10T00:00:06
rtime (azimuth) datetime64[ns] 2013-05-10T00:00:06.015151500 ... 20...
longitude float64 6.38
latitude float64 50.86
altitude float64 116.7
sweep_mode <U20 'azimuth_surveillance'
Data variables:
DBZH (azimuth, range) float32 ...
Attributes:
fixed_angle: 0.6Export to ODIM and CfRadial2¶
[21]:
vol[0].DBZH.sortby("rtime").plot(y="rtime")
[21]:
<matplotlib.collections.QuadMesh at 0x7f0a2daf66e0>
[22]:
vol.to_odim('rainbow_as_odim.h5')
vol.to_cfradial2('rainbow_as_cfradial2.nc')
Import again¶
[23]:
vola = wrl.io.open_odim_dataset('rainbow_as_odim.h5', reindex_angle=False, keep_elevation=True)
display(vola.root)
display(vola[0])
vola[0].DBZH.sortby("rtime").plot(y="rtime")
<xarray.Dataset>
Dimensions: (sweep: 14)
Coordinates:
time datetime64[ns] 2013-05-10T00:00:06
sweep_mode <U20 'azimuth_surveillance'
longitude float64 6.38
altitude float64 116.7
latitude float64 50.86
Dimensions without coordinates: sweep
Data variables:
volume_number int64 0
platform_type <U5 'fixed'
instrument_type <U5 'radar'
primary_axis <U6 'axis_z'
time_coverage_start <U20 '2013-05-10T00:00:06Z'
time_coverage_end <U20 '2013-05-10T00:03:14Z'
sweep_group_name (sweep) <U8 'sweep_0' 'sweep_1' ... 'sweep_13'
sweep_fixed_angle (sweep) float64 0.6 1.4 2.4 3.5 ... 17.9 21.3 25.4 30.0
Attributes:
version: None
title: None
institution: None
references: None
source: None
history: None
comment: im/exported using wradlib
instrument_name: None
fixed_angle: 0.6<xarray.Dataset>
Dimensions: (azimuth: 361, range: 400)
Coordinates:
* azimuth (azimuth) float64 -0.4945 0.5492 1.505 ... 356.5 357.5 358.5
elevation (azimuth) float64 0.6 0.6 0.6 0.6 0.6 ... 0.6 0.6 0.6 0.6 0.6
rtime (azimuth) datetime64[ns] 2013-05-10T00:00:15.500000 ... 2013-...
* range (range) float32 125.0 375.0 625.0 ... 9.962e+04 9.988e+04
time datetime64[ns] 2013-05-10T00:00:06
sweep_mode <U20 'azimuth_surveillance'
longitude float64 6.38
latitude float64 50.86
altitude float64 116.7
Data variables:
DBZH (azimuth, range) float32 ...
Attributes:
fixed_angle: 0.6[23]:
<matplotlib.collections.QuadMesh at 0x7f0a2da00760>
[24]:
volb = wrl.io.open_cfradial2_dataset('rainbow_as_cfradial2.nc')
display(volb.root)
display(volb[0])
volb[0].DBZH.sortby("rtime").plot(y="rtime")
<xarray.Dataset>
Dimensions: (sweep: 14)
Coordinates:
longitude float64 6.38
altitude float64 116.7
sweep_mode <U20 'azimuth_surveillance'
time datetime64[ns] 2013-05-10T00:00:06
latitude float64 50.86
Dimensions without coordinates: sweep
Data variables:
volume_number int64 0
platform_type <U5 'fixed'
instrument_type <U5 'radar'
primary_axis <U6 'axis_z'
time_coverage_start <U20 '2013-05-10T00:00:06Z'
time_coverage_end <U20 '2013-05-10T00:03:14Z'
sweep_group_name (sweep) <U8 'sweep_0' 'sweep_1' ... 'sweep_13'
sweep_fixed_angle (sweep) float64 0.6 1.4 2.4 3.5 ... 17.9 21.3 25.4 30.0
Attributes:
version: None
title: None
institution: None
references: None
source: None
history: None
comment: im/exported using wradlib
instrument_name: None
fixed_angle: 0.6<xarray.Dataset>
Dimensions: (azimuth: 361, range: 400)
Coordinates:
* azimuth (azimuth) float64 -0.4945 0.5492 1.505 ... 356.5 357.5 358.5
elevation (azimuth) float64 0.6 0.6 0.6 0.6 0.6 ... 0.6 0.6 0.6 0.6 0.6
* range (range) float32 125.0 375.0 625.0 ... 9.962e+04 9.988e+04
rtime (azimuth) datetime64[ns] 2013-05-10T00:00:15.500000 ... 2013-...
longitude float64 6.38
latitude float64 50.86
altitude float64 116.7
sweep_mode <U20 'azimuth_surveillance'
time datetime64[ns] 2013-05-10T00:00:06
Data variables:
DBZH (azimuth, range) float32 ...
Attributes:
fixed_angle: 0.6[24]:
<matplotlib.collections.QuadMesh at 0x7f0a2d8dc490>
Check equality¶
We have to sort accordingly and drop the time variables when checking equality.
[25]:
xr.testing.assert_allclose(vol.root, vola.root)
xr.testing.assert_allclose(vol[0].drop(["rtime", "time"]), vola[0].sortby("rtime").drop(["rtime", "time"]))
xr.testing.assert_allclose(vol.root.drop("time"), volb.root.drop("time"))
xr.testing.assert_allclose(vol[0].drop(["rtime", "time"]), volb[0].sortby("rtime").drop(["rtime", "time"]))
xr.testing.assert_allclose(vola.root, volb.root)
xr.testing.assert_allclose(vola[0].drop("rtime"), volb[0].drop(["rtime"]))
More Rainbow5 loading mechanisms¶
Use xr.open_dataset to retrieve explicit group¶
[26]:
swp = xr.open_dataset(f, engine="rainbow", group=5, backend_kwargs=dict(reindex_angle=False))
display(swp)
<xarray.Dataset>
Dimensions: (azimuth: 361, range: 400)
Coordinates:
* azimuth (azimuth) float64 166.5 167.5 168.5 169.5 ... 164.5 165.5 166.5
elevation (azimuth) float64 6.3 6.3 6.3 6.3 6.3 ... 6.3 6.3 6.3 6.3 6.3
* range (range) float32 125.0 375.0 625.0 ... 9.962e+04 9.988e+04
time datetime64[ns] 2013-05-10T00:01:14
rtime (azimuth) datetime64[ns] 2013-05-10T00:01:14.015151500 ... 20...
longitude float64 6.38
latitude float64 50.86
altitude float64 116.7
sweep_mode <U20 'azimuth_surveillance'
Data variables:
DBZH (azimuth, range) float32 ...
Attributes:
fixed_angle: 6.3