Plot geodata¶
underlay e.g. terrain data from a Digital Elevation Model (DEM)
overlay features such as administrative borders, rivers, catchments, rain gauges, cities, …
Here, we create a map without radar data to concentrate on the other layers.
[1]:
import wradlib as wrl
import matplotlib.pyplot as pl
import warnings
warnings.filterwarnings('ignore')
try:
get_ipython().magic("matplotlib inline")
except:
pl.ion()
import numpy as np
# Some more matplotlib tools we will need...
import matplotlib.ticker as ticker
from matplotlib.colors import LogNorm
from mpl_toolkits.axes_grid1 import make_axes_locatable
Plotting a Digital Elevation Model (DEM)¶
We use a preprocessed geotiff which was created from SRTM data via gdal
gdalwarp -te 88. 20. 93. 27. srtm_54_07.tif srtm_55_07.tif srtm_54_08.tif srtm_55_08.tif bangladesh.tif
Here we - read the DEM via wradlib.io.open_raster and extracted via wradlib.georef.extract_raster_dataset. - resample the data to a (lon/lat) grid with spacing=0.005
.
Note: we organise the code in functions which we can re-use in this notebook.
[2]:
def plot_dem(ax):
filename = wrl.util.get_wradlib_data_file('geo/bangladesh.tif')
ds = wrl.io.open_raster(filename)
# pixel_spacing is in output units (lonlat)
ds = wrl.georef.reproject_raster_dataset(ds, spacing=0.005)
rastervalues, rastercoords, proj = wrl.georef.extract_raster_dataset(ds)
# specify kwargs for plotting, using terrain colormap and LogNorm
dem = ax.pcolormesh(rastercoords[..., 0], rastercoords[..., 1],
rastervalues, cmap=pl.cm.terrain, norm=LogNorm(vmin=1, vmax=3000),
)
# make some space on the right for colorbar axis
div1 = make_axes_locatable(ax)
cax1 = div1.append_axes("right", size="5%", pad=0.1)
# add colorbar and title
# we use LogLocator for colorbar
cb = pl.gcf().colorbar(dem, cax=cax1,
ticks=ticker.LogLocator(subs=range(10)))
cb.set_label('terrain height [m]')
[3]:
fig = pl.figure(figsize=(10,10))
ax = fig.add_subplot(111, aspect='equal')
plot_dem(ax)
Plotting borders¶
For country borders, we use ESRI Shapfiles from Natural Earth Data.
We extract features using - the OGR.Layer
AttributeFilter
and - the wradlib.georef.get_vector_coordinates function.
The plot overlay is done via wradlib.vis.add_lines.
[4]:
def plot_borders(ax):
# country list
countries = ['India', 'Nepal', 'Bhutan', 'Myanmar']
# open the input data source and get the layer
filename = wrl.util.get_wradlib_data_file('geo/ne_10m_admin_0_boundary_'
'lines_land.shp')
dataset, inLayer = wrl.io.open_vector(filename)
# iterate over countries, filter accordingly, get coordinates and plot
for item in countries:
# SQL-like selection syntax
fattr = "(adm0_left = '" + item + "' or adm0_right = '" + item + "')"
inLayer.SetAttributeFilter(fattr)
# get borders and names
borders, keys = wrl.georef.get_vector_coordinates(inLayer, key='name')
wrl.vis.add_lines(ax, borders, color='black', lw=2, zorder=4)
ax.autoscale()
[5]:
fig = pl.figure(figsize=(10,10))
ax = fig.add_subplot(111, aspect='equal')
plot_dem(ax)
plot_borders(ax)
ax.set_xlim((88, 93))
ax.set_ylim((20, 27))
[5]:
(20.0, 27.0)
Plotting Rivers¶
For rivers, we use ESRI Shapfiles from FAO and Natural Earth Data.
We extract features using - the OGR.Layer
SpatialFilter
and - the wradlib.georef.get_vector_coordinates function.
Then we use wradlib.vis.add_lines again for the overlay.
[6]:
def plot_rivers(ax):
# plot rivers from esri vector shape, filter spatially
# http://www.fao.org/geonetwork/srv/en/metadata.show?id=37331
# open the input data source and get the layer
filename = wrl.util.get_wradlib_data_file('geo/rivers_asia_37331.shp')
dataset, inLayer = wrl.io.open_vector(filename)
# do spatial filtering to get only geometries inside bounding box
inLayer.SetSpatialFilterRect(88, 20, 93, 27)
rivers, keys = wrl.georef.get_vector_coordinates(inLayer, key='MAJ_NAME')
# plot on ax1, and ax4
wrl.vis.add_lines(ax, rivers, color=pl.cm.terrain(0.), lw=0.5, zorder=3)
[7]:
fig = pl.figure(figsize=(10,10))
ax = fig.add_subplot(111, aspect='equal')
plot_dem(ax)
plot_borders(ax)
plot_rivers(ax)
ax.set_xlim((88, 93))
ax.set_ylim((20, 27))
[7]:
(20.0, 27.0)
[8]:
def plot_water(ax):
# plot rivers from esri vector shape, filter spatially
# plot rivers from NED
# open the input data source and get the layer
filename = wrl.util.get_wradlib_data_file('geo/ne_10m_rivers_lake_'
'centerlines.shp')
dataset, inLayer = wrl.io.open_vector(filename)
inLayer.SetSpatialFilterRect(88, 20, 93, 27)
rivers, keys = wrl.georef.get_vector_coordinates(inLayer)
wrl.vis.add_lines(ax, rivers, color=pl.cm.terrain(0.), lw=0.5, zorder=3)
[9]:
fig = pl.figure(figsize=(10,10))
ax = fig.add_subplot(111, aspect='equal')
plot_dem(ax)
plot_borders(ax)
plot_rivers(ax)
plot_water(ax)
ax.set_xlim((88, 93))
ax.set_ylim((20, 27))
[9]:
(20.0, 27.0)
Plotting Cities¶
The 5 biggest cities of bangladesh are added using simple matplotlib functions.
[10]:
def plot_cities(ax):
# plot city dots with annotation, finalize plot
# lat/lon coordinates of five cities in Bangladesh
lats = [23.73, 22.32, 22.83, 24.37, 24.90]
lons = [90.40, 91.82, 89.55, 88.60, 91.87]
cities = ['Dhaka', 'Chittagong', 'Khulna', 'Rajshahi', 'Sylhet']
for lon, lat, city in zip(lons, lats, cities):
ax.plot(lon, lat, 'ro', zorder=5)
ax.text(lon + 0.01, lat + 0.01, city, fontsize='large')
[11]:
fig = pl.figure(figsize=(10,10))
ax = fig.add_subplot(111, aspect='equal')
plot_dem(ax)
plot_borders(ax)
plot_rivers(ax)
plot_water(ax)
plot_cities(ax)
ax.set_xlim((88, 93))
ax.set_ylim((20, 27))
ax.set_xlabel('Longitude')
ax.set_ylabel('Latitude')
ax.set_aspect('equal')
ax.set_title('Bangladesh')
[11]:
Text(0.5, 1.0, 'Bangladesh')
Plotting country patches¶
Plotting in “geographic projection” (WGS84)¶
Here, we plot countries as patches
on a lat/lon (WGS84) map (data from Natural Earth Data again).
We again extract the features using - the OGR.Layer
SpatialFilter
and - wradlib.georef.get_vector_coordinates.
Then the patches are added one by one via wradlib.vis.add_patches.
[12]:
def plot_wgs84(ax):
from osgeo import osr
wgs84 = osr.SpatialReference()
wgs84.ImportFromEPSG(4326)
# some testing on additional axes
# add Bangladesh to countries
countries = ['India', 'Nepal', 'Bhutan', 'Myanmar', 'Bangladesh']
# create colors for country-patches
cm = pl.cm.jet
colors = []
for i in range(len(countries)):
colors.append(cm(1. * i / len(countries)))
# open the input data source and get the layer
filename = wrl.util.get_wradlib_data_file('geo/ne_10m_admin_0_'
'countries.shp')
dataset, layer = wrl.io.open_vector(filename)
# filter spatially and plot as PatchCollection on ax3
layer.SetSpatialFilterRect(88, 20, 93, 27)
patches, keys = wrl.georef.get_vector_coordinates(layer,
dest_srs=wgs84,
key='name')
i = 0
for name, patch in zip(keys, patches):
# why comes the US in here?
if name in countries:
wrl.vis.add_patches(ax, patch, facecolor=colors[i],
cmap=pl.cm.viridis, alpha=0.4)
i += 1
ax.autoscale(True)
ax.set_aspect('equal')
ax.set_xlabel('Longitude')
ax.set_ylabel('Latitude')
ax.set_title('South Asia - WGS 84')
[13]:
fig = pl.figure(figsize=(10,10))
ax = fig.add_subplot(111, aspect='equal')
plot_wgs84(ax)
Plotting with a map projection¶
Here, we plot countries as patches on a projected map.
We extract the features using - the OGR.Layer
AttributeFilter
and - the wradlib.georef.get_vector_coordinates function.
The coordinates of the features are reprojected on the fly using the dest_srs
keyword of wradlib.georef.get_vector_coordinates.
Then, the patches are added to the map via wradlib.vis.add_patches.
[14]:
def plot_mercator(ax):
from osgeo import osr
proj = osr.SpatialReference()
# "Web Mercator" projection (used by GoogleMaps, OSM, ...)
proj.ImportFromEPSG(3857)
# add Bangladesh to countries
countries = ['India', 'Nepal', 'Bhutan', 'Myanmar', 'Bangladesh']
# create colors for country-patches
cm = pl.cm.jet
colors = []
for i in range(len(countries)):
colors.append(cm(1. * i / len(countries)))
# open the input data source and get the layer
filename = wrl.util.get_wradlib_data_file('geo/ne_10m_admin_0_'
'countries.shp')
dataset, layer = wrl.io.open_vector(filename)
# iterate over countries, filter by attribute,
# plot single patches on ax2
for i, item in enumerate(countries):
fattr = "name = '" + item + "'"
layer.SetAttributeFilter(fattr)
# get country patches and geotransform to destination srs
patches, keys = wrl.georef.get_vector_coordinates(layer,
dest_srs=proj,
key='name')
wrl.vis.add_patches(pl.gca(), patches, facecolor=colors[i])
ax.autoscale(True)
ax.set_aspect('equal')
ax.set_xlabel('X - Coordinate')
ax.set_ylabel('Y - Coordinate')
ax.ticklabel_format(style='sci', scilimits=(0, 0))
ax.set_title('South Asia in Web Mercator Projection ')
[15]:
fig = pl.figure(figsize=(10,10))
ax = fig.add_subplot(111, aspect='equal')
plot_mercator(ax)